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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907179.1_cds_XP_016457314.1_51052
CDS Infomation

[gene=LOC107781169] [db_xref=GeneID:107781169] [protein=DNA polymerase delta catalytic subunit-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016457314.1] [location=join(9131..9208,9317..9491,9640..9689,14763..14924,14988..15086,15332..15439,15587..15682,15760..15825,16534..16590,16762..16849,16962..17041,19083..19196,20386..20500,25714..25886,25995..26066,29322..29396,29483..29572,29648..29808,30330..30403,30545..>30632)] [gbkey=CDS]
Sequence

ATGTTTCTAGTTCTTACCCTCACTGGACTTCCTAATGATCTTGATTCAGTACGCGATCAG
ATTTTGGCTAGTCCGACTACAGTGGATGTTCGGGCGTCTCAAACTATGGAGAATAGACAA
GGAGGAGGTCGTTTTGGAAGATCTAGAACCAAGTATTCTTATTGTCACAAACTTGGACAC
ACTCGTGAAATGTGCTATTCCTTACATGGTCGTCCACCCAAAAATGCTTACATTGCTCAG
ACCGAGACTACAATACTCTTGGACCATGAGTCATGGACTCAGGCGCTTCTGATCACTTCT
CTGTTTCACTATACAAAAAAACTGAATGCATTAGTTCCATTACAGGATGCTTATCTCCCG
CAACGGCTTTTGGATAAATTAATGTTCATTTATAACTATGTGGAGATGGCTCGAGTTACT
GGTGTACCTATATCTTTTCTTCTCGCAAGAGGGCAAAGCATTAAGGTACTCTCTCAACTT
TTAAGGAAGGCGAGGCAAAGGAATCTTGTTATACCAAATGTAAAACAGGCTGGATCTGAG
CAAGGAACATATGAGGGTGCGACGGTTTTGGAGGCTCGAGCTGGTTTTTATGAGAAGCCA
ATTGCAACTTTGGATTTTGCATCTCTATATCCGTCGATCATGATGGCATATAATTTATGT
TACTGCACGCTAGTAACTCCTGAAGAGTTCCACAAACTAAACCTCTGTGAAGTGGATGTC
AACAAGACCCCTTCTGGTGAAATGTTTGTCAAGTCAGATTTACAGAAGGGGATACTTCCA
GAAATTCTTGAAGAACTATTGGCCGCTCGCAAAAGAGCAAAAGCAGATTTAAAGGAAGCA
AAAGATCCTTTAGTCAAAGCTGTCTTAGATGGACGTCAGCTAGCTTTGAAGATTAGTGCA
AATTCAGTATATGGGTTTACTGGAGCTACTGTTGGTCAATTACCATGTTTAGAAATATCT
TCAAGTGTTACTAGCTATGGTCGACAGATGATTGAGAAGACAAAAAAGCTTGTGGAGGAC
AAGTTCACAGTACTTAAGGGGTATGAACACAATGCTGAGGTTATATATGGAGATACAGAT
TCGGTGATGGTGCAGTTTGGTGTGCCTACAGTGGAAGAGGCTATGAAATTGGGTAGAGAA
GCTGCTGACCACATTAGTGAGACATTTATCAAACCATTAAGACTAGAATTTGAGAAGATA
TATTATCCATATCTGCTGATTAGCAAGAAGAGATATGCCGGCCTTCTATGGACAAATCCA
GACAAACATGACAAAATGGACGCTAAAGGGATTGAAACTGTTCGGAGGGATAATTGTCTC
TTGGTCAAGAACCTTGTAACCGAGTGCCTTCATAAAATACTAATGGACAGAGATGTTCCT
GGTGCTGTTCAATATGTCAAGAATACTATCTCAGATCTTCTCATGAACCGCATGGATTTA
TCTCTTTTGGTTATTACTAAGGGTCTGACGAAAACTGGAGATGATTATGAAGTAAAGGCA
GCACATGTTGAACTTGCAGAGCGAATGCGCAAGCGAGATGCTGCTACTGCACCTAATATT
GGTGATAGAGTACCTTACGTCATCATTAAAGCTGCAAAAGGTTCCAAGGCATATGAAAAG
TCAGAGGACCCTATTTACGTATTAGAGAACAACATACCTATAGATCCTCATTACTATCTT
GAAAATCAAATTAGTAAGCCACTTCTGAGGATTTTTGAGCCAATACTGAAGAATGCAAGT
AAAGAGCTTCTTCAAGGAAGTCATACAAGATCGATCTCAATATCGACCCCTTCAAACAGT
GGTATTATGAAATTTGCTAAGAAGCAACTCACTTGCATTGGATGCAAAGCACTAATCAGT
GGTTCTGATCGAACTCTCTGCAATCACTGCAAAGGAAGAGAAGCTGAACTTTATTGCAGA
TCCGTGGCTAATGTGGCTGAACTAGAGAAGCTTTTTGGGAGGCTATGGACACAATGCCAA
GAATGCCAAGGCTCTCTTCATCAGGATGTCCTATGCACTAG

Peptide Sequence

PEP ID

XP_016457314.1
PEP Infomation

PREDICTED: DNA polymerase delta catalytic subunit-like, partial [Nicotiana tabacum]
Sequence

MFLVLTLTGLPNDLDSVRDQILASPTTVDVRASQTMENRQGGGRFGRSRTKYSYCHKLGH
TREMCYSLHGRPPKNAYIAQTETTILLDHESWTQALLITSLFHYTKKLNALVPLQDAYLP
QRLLDKLMFIYNYVEMARVTGVPISFLLARGQSIKVLSQLLRKARQRNLVIPNVKQAGSE
QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPEEFHKLNLCEVDV
NKTPSGEMFVKSDLQKGILPEILEELLAARKRAKADLKEAKDPLVKAVLDGRQLALKISA
NSVYGFTGATVGQLPCLEISSSVTSYGRQMIEKTKKLVEDKFTVLKGYEHNAEVIYGDTD
SVMVQFGVPTVEEAMKLGREAADHISETFIKPLRLEFEKIYYPYLLISKKRYAGLLWTNP
DKHDKMDAKGIETVRRDNCLLVKNLVTECLHKILMDRDVPGAVQYVKNTISDLLMNRMDL
SLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNIGDRVPYVIIKAAKGSKAYEK
SEDPIYVLENNIPIDPHYYLENQISKPLLRIFEPILKNASKELLQGSHTRSISISTPSNS
GIMKFAKKQLTCIGCKALISGSDRTLCNHCKGREAELYCRSVANVAELEKLFGRLWTQCQ
ECQGSLHQDVLCTSRDCPIFYRRKKAQ

Transcript Sequence

Gene sequence data has not been registered.